Not sure if you figured it out yet but on the off chance you haven't I ran into this same issue a while ago with my 2008 S5 4.2L V8. Your car and my car should have an almost identical intake manifold with the same runners and actuator. For starters, no it is not a vacuum leak, the runners are all controlled electronically. My issue was that m runner control actuator was completely broken and needed replacing. This is the one I bought for $200 and it works great
https://www.rockauto.com/en/moreinfo...=17824&jsn=595.
Your issue may be different but there are ways to check. For starters, when you start your car, after a few seconds you should see the actuator move and the position of the runners change. I cant remember if it moves from fully open to fully closed or fully closed to fully open but regardless they should move through their full range of motion. You can see this happen where the actuator connects to the position sensors. These are visible at the front outside of the manifold above cylinders 1 and 5. If it moves your runner control actuator is probably fine. If it doesn't, then you are going to have to dig a little deeper. Disconnected the runner control arms from the runners so that you can open and close the runners by hand. They should both turn about 45 degrees freely. If they don't, that's your problem and you will need to take the manifold off and take it apart to figure out what is preventing the runner from moving. Id be very surprised if the issue is with the runners. Its far more likely that the runner control is broken.
Regardless of what you find the problem is you are going to have to remove the intake manifold to fix whatever is broken. This is not an easy task and it will take some finesse but if you have the time and patience you are going to save a ton of money compared to taking it to a shop. While you have it off, I recommend doing a few preventative maintenance things.
The first relatively easy and cheap thing I would do, is clean your throttle body.
The second, thing I would check/do is make sure there is not a ton of carbon buildup on your intake valves. If there is, you should clean it. cleaning this is relatively cheap but it is difficult and time consuming. You should be able to do this with a drill, zip ties, and some liqui molly carbon buildup remover. Just look up a few YouTube videos on how to do it with the zip ties and you should be good. In the YouTube videos they should tell you that you need to make sure the valves are fully closed before pouring the liqui molly in there. On the off-chance they don't, you need to make sure the valves are fully closed before putting the liqui molly in there or you will destroy your engine.
The final thing I would do is pull the injectors and get them tested and cleaned if necessary.
https://crazyfuelinjectiondragparts.com/ This is the place I'm taking my injectors too and it costs $240 to get them all done. This should keep your engine running well and also prevent leaks and misfires. Unfortunately I learned it probably would have been a good idea to do this the first time I took the manifold off the hard way because my injectors are currently causing misfires and gas is leaking into my oil so I have to pull the manifold all over again just to get at the stupid injectors so I can get them cleaned.
Hopefully this helps, if you want any more information or have any questions let me know.
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