OK I fixed it, and I feel like an idiot. It was that 60 amp fuse that Wheelbarrow had previously mentioned. Making me do that test with the meter and questioning why the constant power line was off was key to make me get technical enough to fully understand the circuit. I confirmed using this wiring diagram where pin 4 came from(S42 40a in the pic), and traced it to the fuse. I kept looking at that fuse thinking it would look burned out, and said well since I have it out I should at least test it, and lo and behold that was it. Bottom line is I'll never trust a visual confirmation on a fuse again.
As a means of a small writeup post investigation and fix to give back to the community, this is how I would confirm this circuit again (in order) in the future if it recurred. Thanks to WB and GIN for the help and direction!
1. Pull the fan fuse under the dash and test it with an actual fuse tester (don't just verify visually)
2. If that fuse is good, then do the voltmeter test. If you get the results I got on pins 2 and 3, but also juice on pin 4 then it would appear that is all good from the ecu, fuse, and the FCM input. Using your voltmeter, put the black probe into pin 1 and test pins 2-4 with the red probe using the "20" volts setting, while the car is running alternate your AC to LO and OFF to see changes on pin 3.
3. If all is good down to the FCM input, then Test the output wires on the FCM, and if you get voltage on the orange and purple lines going to the fans then your FCM is probably good too (car running with AC on LO).
4. If all is good on the FCM output wires, then jump both fans directly to the battery to test them.
5. If these all test good, THEN i would mess with VCDS and check your coolant temperature readings to verify your lower CTS is functioning correctly. If you have a registered version of VCDS and a Ross Tech cable, then you could also try the output tests to force the fans on. The reason I suggest VCDS last is that it is not all that intuitive for this circuit, and all the physical things can be done pretty quickly and are easier for most people to attempt sans computer knowledge.
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