Thought I'd bump an old thread and shed some light on this topic. Was upgrading the brakes on my B6 and made some discoveries.
I pulled the front brakes off of a B7 in the local parts yard with intentions of getting some S4 carriers and running 345mm rotors. I bought some S4 carriers from a member on here, and in some kind of confusion he sent me one B6 S4 caliper as well.
I installed the B7 A4 calipers since they were a matching pair. I ended up getting the clearance issue that a lot people have reported where the rotor rubs on the inside of the caliper. Wasn't enthused! Did some forum research and couldn't find a solid answer explaining why.
Decided to find a matching caliper for my B6 S4 caliper. It's difficult to do this by part number, but I noticed that some of the calipers on eBay that were listed as B7 A4 matched my B6 S4 caliper upon visual inspection. The matching caliper I got on eBay was listed as a B7 A4 Cabriolet caliper.
So it does turn out that there were two different styles of caliper for the B7 A4. Some will work with the 345mm rotor upgrade, and some have the clearance issue.
Left: Bad. Right: Good.
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Not enough clearance with the left caliper.
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Adequate clearance with the right caliper.
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Best tell-tale visual difference is the extra bar going across the U-shaped gap on the outside of the caliper.
I know I'm super late to the party but hopefully this helps someone.
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